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Annals of Clinical and Translational Neurology

Wiley

Preprints posted in the last 7 days, ranked by how well they match Annals of Clinical and Translational Neurology's content profile, based on 29 papers previously published here. The average preprint has a 0.04% match score for this journal, so anything above that is already an above-average fit.

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Three-Month Observational Data for the MPS IIIB Sentinel Subject Following AAV9 Mediated Gene Therapy

Ma, X.; Gu, R.; Ma, W.; Xu, Q.; Wang, R.; Wang, W.; Liang, M.; Liu, X.; Yang, X.; Zhuang, L.; Zhang, W.; Zeng, X.; Xu, J.; Xu, X.; Wu, Z.; Xia, Y.; Liu, Y.; Zhou, J.; Zhu, X.; Wang, H.; Dong, Z.; Yang, W.; Dai, Y.; Pan, X.; Li, X.; Wang, Y.; Dong, X.; Wu, X.; Feng, Z.

2026-06-09 neurology 10.64898/2026.06.01.26354386 medRxiv
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Background: Mucopolysaccharidosis type IIIB (MPS IIIB) is a devastating neurodegenerative lysosomal storage disorder caused by alpha-N-acetylglucosaminidase (NAGLU) deficiency. There is currently no approved therapy. We report the 3-month outcomes of a novel intracerebroventricular (ICV) gene therapy in a child with MPS IIIB. Methods: In an open-label, single-center, investigator-initiated trial (ChiCTR2600121466), a single dose of RDGT-101 (2.0E14; vg of an AAV9 vector encoding human NAGLU) was administered via ICV infusion. Primary outcomes were safety and tolerability. Secondary outcomes included serum NAGLU activity, urinary heparan sulfate (HS) excretion, and neurocognitive function. Exploratory analyses included hematological parameters. Results: The patient achieved serum NAGLU activity (17.06 nmol/mL/hour) approaching that of healthy controls (17.75 {+/-} 1.37 nmol/mL/hour) by Month 3, accompanied by a 58.4% reduction in urinary HS. Clinically, previously severe hand and toe contractures resolved, allowing for full extension. Neurocognitive improvements were observed, including clear articulation, logical conversation, and sustained eye contact. Hematological analyses revealed normalized red blood cell indices and improved iron utilization. No dose-limiting toxicities, serious adverse events, or clinically significant laboratory abnormalities were observed. Conclusions: A single ICV infusion of RDGT-101 was safe and well-tolerated in this patient with MPS IIIB. Early biochemical correction was accompanied by marked improvements in somatic, neurocognitive, and hematological parameters. These findings support further investigation of ICV AAV9 gene therapy for MPS IIIB.

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A novel diagnostic intracranial EEG biomarker in MOGHE

Gnatkovsky, V.; Poguzhelskaya, E.; Borger, V.; Surges, R.; Klotz, K. A.; Zschernack, V.; Hartlieb, T.; Kudernatsch, M.; Gaballa, A.; Cloppenborg, T.; Woermann, F. G.; Kalbhenn, T.; Hamer, H.; Gollwitzer, S.; Rampp, S.; Delev, D.; Mayer, F.; Roessler, K.; Quinot, V. A.; Muhlebner, A.; Toledano, R.; Gil-Nagel, A.; Coras, R.; Blumcke, I.; Kobow, K.

2026-06-08 neurology 10.64898/2026.06.05.26355018 medRxiv
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Mild malformation of cortical development with oligodendroglial hyperplasia and epilepsy (MOGHE) is a recently recognized cause of drug-resistant focal epilepsy. It is often MRI-negative or shows imaging features mimicking focal cortical dysplasias, which makes recognition difficult and limits presurgical counseling. We aimed to identify an intracranial EEG (iEEG) biomarker that distinguishes MOGHE from other developmental brain lesions encountered in epilepsy surgery. In a retrospective multicenter test cohort of 38 patients (18 MOGHE, 20 non-MOGHE), we analyzed long-term stereo-EEG and subdural recordings. Only MOGHE patients showed highly stereotyped clusters of very brief low-voltage fast activity (LVFA) events, organized into status-like 3 to 12-minute episodes that often lacked clear clinical symptoms. LVFA clusters were present in 16/18 MOGHE and 0/22 non-MOGHE patients. We then tested diagnostic performance in an independent, blinded single-center validation cohort of 22 patients (11 MOGHE, 11 non-MOGHE), in which visual identification of LVFA clusters correctly classified 10/11 MOGHE and 10/11 non-MOGHE cases (Cohens kappa=0.82). Penalized logistic regression further confirmed MOGHE histology as the strongest predictor of LVFA clusters, independent of age and lobe localization. Because LVFA clusters can be recognized visually on routine intracranial EEG recordings without specialized software, this biomarker is readily applicable in clinical practice and may improve presurgical identification of MOGHE. Future prospective studies should determine whether its recognition influences surgical planning, improves outcome prediction, or facilitates selection of patients for mechanism-based therapies.

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Structured Patterns of Muscle Involvement in CAV3-Related Myopathy Revealed by Whole-Body CT Imaging

De Los Reyes, F. V. A.; Hayashi, S.; Saito, Y.; Ogawa, M.; Oya, Y.; Noguchi, S.; Nishino, I.

2026-06-04 radiology and imaging 10.64898/2026.06.03.26354504 medRxiv
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Caveolinopathies caused by CAV3 mutations present with heterogeneous clinical phenotypes ranging from asymptomatic hyperCKemia to limb-girdle-type muscular dystrophy. Although prior imaging studies have described commonly affected muscles, structured modeling of muscle involvement patterns in caveolinopathy has not been established. We analyzed whole-body skeletal muscle computed tomography imaging in eight patients with pathogenic or likely pathogenic CAV3 variants, comprising 14 imaging study samples. Fat infiltration across 43 muscles was graded using modified Mercuri scores. Computational multivariate analysis,including principal component analysis, clustering, and pseudotime modeling,was applied to characterize severity staging and distribution patterns. A statistically supported, stage-dependent continuum of muscle involvement was identified. Most samples demonstrated a distributed limb-girdle-predominant pattern with coordinated progression across muscle clusters. In contrast, one patient (three samples in longitudinal series) exhibited a compartment-restricted thigh-dominant pattern characterized by early posterior and medial thigh involvement. Rectus femoris showed consistent stage-dependent progression, while greater medial gastrocnemius involvement was associated with advanced severity. None of the patients exhibited clinical evidence of rippling muscle disease. These findings suggest that integrating semi-quantitative imaging with computational modeling may provide an objective framework for characterizing muscle involvement patterns in CAV3-related myopathy.

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DHDDS-related juvenile parkinsonism is caused by impaired lipid metabolism, glycosylation, and mitochondrial dysfunction, which can be rescued by NAD⁺ treatment.

Muffels, I. J. J.; Kantautas, K. A.; MacDonald, G.; Garapati, K.; Pasupuleti, R. R.; Tinker, R. J.; Shah, R.; Thevandavakkam, M. A.; Donnelly, J.; Hrtska, R.; Smith, D.; Van Klinken, J. B.; Vaz, F.; Pandey, A.; Perlstein, E.; Kozicz, T.; Morava, E.

2026-06-05 genetic and genomic medicine 10.64898/2026.05.28.26354198 medRxiv
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Background: Mono-allelic Dehydrodolichyl Diphosphate Synthase (DHDDS) variants are associated with juvenile Parkinsonism, developmental delay and seizures. Symptoms are progressive, and various mechanisms, such as defective glycosylation, lysosomal dysfunction and cholesterol accumulation have been hypothesized to underlie disease symptoms. There is no treatment for DHDDS-related disease. Methods: Patient-derived cortical forebrain organoids were created to elucidate disease mechanisms and evaluate potential treatments. In these neuronal models, glycosylation, lipidomics, proteomics, cholesterol/ganglioside accumulation, mitochondrial function and electrophysiological activity were assessed. Finally, we investigated the effects of nicotinamide mononucleotide (NMN), identified through a yeast-based drug screen, in neuronal cell models and in six patients in an off-label, N-of-1, observational series. Results: DHDDS-patient derived organoids showed visual signs of degeneration after four months of culturing. This was accompanied by significant cholesterol accumulation in astrocytes, decreased mitochondrial respiration and loss of deep-layer neurons. In addition, we identified glycosylation abnormalities, showing for the first time that glycosylation in human tissue is affected by monoallelic DHDDS variants. Proteomic analysis revealed altered protein expression of proteins involved in lipid metabolism, cytoskeletal organization and neuronal development. We found that oral Nicotinamide Mononucleotide supplementation led to significant improvement in mitochondrial respiration and electrophysiological parameters in organoids, concurring with clinical improvements in all of the treated patients, particularly regarding their ataxia and tremor. Conclusion: Our findings reveal a progressive phenotype in DHDDS-patient-derived brain organoids, with mitochondrial dysfunction and astrocyte-specific metabolic alterations contributing to disease pathology. Notably, NMN treatment led to clinical improvements in patients with heterozygous DHDDS variants, highlighting its potential as a therapeutic strategy.

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Multimodal approach to identify neuropsychophysiological subgroups in myalgic encephalomyelitis/chronic fatigue syndrome and their relevance for rehabilitation: protocol for a mechanistic cross-sectional and longitudinal study

Dooms, Y.; Qiu, L.; Coppieters, I.; Vergaelen, E.; Claes, S.; Dupont, P.; Hehl, M.; Cuypers, K.; Engler, H.; Dombrowski, K.; Verbeke, K.; Van den Bergh, O.; Raes, J.; Van Oudenhove, L.; Van Den Houte, M.; Bogaerts, K.

2026-06-08 neurology 10.64898/2026.06.05.26354983 medRxiv
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Introduction: Myalgic Encephalomyelitis (ME)/Chronic Fatigue Syndrome (CFS) is a debilitating condition characterised by severe fatigue and post-exertional malaise (PEM). Reported neuropsychophysiological abnormalities suggest ME/CFS is multifactorial, but current knowledge remains fragmented. This study protocol outlines a multimodal investigation designed to (1) compare neuropsychophysiological mechanisms between ME/CFS patients and healthy participants, (2) test an integrative model of ME/CFS, (3) identify neuropsychophysiological subgroups within the patient population, and (4) identify predictors of symptom response during rehabilitation. Methods and analysis: This study will enroll 115 ME/CFS patients and 55 healthy participants. Groups will be comparable in age, sex, and education level, with a larger patient sample enabling subgroup and longitudinal analyses. A cross-sectional assessment at baseline will be carried out in both groups. Patients will then be evaluated longitudinally throughout a standardized cognitive-behavioral therapy rehabilitation program delivered as routine care. Baseline measures include systemic inflammation and general health biomarkers, measures of autonomic and central nervous system function, neuroinflammation (magnetic resonance spectroscopy, [18F]DPA714 PET in a subsample), serum short-chain fatty acid levels, gut microbiota composition and function, and neuroendocrine and self-reported responses to psychosocial stress. Fatigue severity (physical and cognitive) and PEM will be assessed through validated questionnaires, ecological momentary assessment, and laboratory tasks. These will be re-evaluated during therapy, and all non-neuroimaging measures will be repeated after the rehabilitation program. Statistical analyses will comprise multivariate analysis of variance, general linear models, classification algorithms, structural equation models, least absolute shrinkage selection operator principal component regression (LASSO-PCR), cluster analysis and latent class growth analysis (LCGA).

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Oxygen-based endotypes of Obstructive Sleep Apnea

Wellman, A.; Messineo, L.; Azarbarzin, A.; Esmaeili, N.; Aishah, A.; Vena, D.; Sumner, J.; White, D.; Sands, S.

2026-06-04 respiratory medicine 10.64898/2026.06.03.26354835 medRxiv
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Objective: Several endotypes contribute to the development of Obstructive Sleep Apnea (OSA). However, efforts to measure these endotypes have been challenging. In this paper, we propose a new method that overcomes some of these challenges. Methods: To test the feasibility of this new method, data from the Sleep Heart Health Study (SHHS) were analyzed and two oxygen-based endotypes were identified and plotted on a graphical model: the steady-state SpO2 and the SpO2 arousal threshold. The first is the oxygen saturation that would occur during sleep if there were no arousals, and it is a measure of upper airway collapsibility (a more collapsible airway produces a lower SpO2). The latter is the oxygen saturation that triggers arousals. These endotypes were validated by assessing their ability to detect positional and state-related changes in airway collapsibility and arousal threshold. Results: The study showed that it was feasible to measure oxygen-based endotypes in 95% of SHHS participants. As expected, steady-state SpO2 was lower during supine vs. non-supine sleep, as well as during REM vs. NREM sleep. Also, the SpO2 arousal threshold was similar between supine and non-supine sleep. However, SpO2 arousal threshold was not lower in REM sleep vs. NREM sleep. Therefore, in 3 of the 4 conditions, the oxygen-based endotypes moved in the expected direction due to positional or sleep state changes. Conclusion: Although further validation experiments are required, this study indicates that OSA endotyping using the pulse oximetry signal is feasible. The oxygen-based endotypes could be used to aid therapeutic decision making.

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Influence of comorbid diabetes mellitus on outcomes in multiple sclerosis: an English population-based matched cohort study

Lau, Y.; Zabihi, S.; Hartmann, M.; Mathlin, G.; Banerjee, S.; Marouf, E.; Hadley, C.; Cooper, C.; Dobson, R.

2026-06-10 neurology 10.64898/2026.06.05.26354993 medRxiv
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Importance: As new treatments increase quality and length of life in people with multiple sclerosis (MS), effective prevention and management of common comorbidities, including Diabetes Mellitus (DM), is increasingly important. Objective: To compare incidence of DM and its associations with hospitalisation and mortality in adults with MS and matched controls. Design: Using English primary care data from the Clinical Practice Research Datalink (CPRD), linked to Hospital Episode Statistics and national mortality records, we matched adults with MS diagnosed between 2000 and 2023, with up to ten controls without MS by age, sex, and practice. We excluded individuals with preexisting DM, defined using diagnostic and management codes. Outcomes included all-cause hospitalisation (number and duration) and mortality. We used Poisson, negative binomial, linear, and Cox proportional hazards models, adjusting for demographic and socioeconomic factors, adding interaction terms to examine if ethnicity, deprivation, and urbanity were associated with outcomes. Results: We included 9,010 individuals with MS and 78,121 matched controls. Over a mean follow-up of 13.2 years, people with MS had over twice the incidence of DM compared with controls (adjusted incidence rate ratio [aIRR]=2.26, 95% CI: 1.96 to 2.61, p<0.001). Among people with MS, incident DM was associated with higher hospitalisation rates (aIRR=1.82, 95%CI: 1.47 to 2.28, p<0.001), longer hospitalisation duration (median 18 vs 4 days, adjusted beta;=0.53, 95%CI: 0.41 to 0.65, p<0.001), and increased all-cause mortality when incident DM was modelled as a time-varying exposure (adjusted hazard ratio=1.46, 95%CI: 1.17 to 1.82, p<0.001), compared to those who did not develop DM. Similar patterns were observed among controls (hospitalisation rates: aIRR = 2.96, 95% CI 2.63 to 3.23, p<0.001; hospitalisation duration: adjusted {beta} = 0.93, 95% CI: 0.86 to 0.99, p<0.001; mortality [time-varying]: HR = 1.50, 95% CI: 1.27 to 1.77, p<0.001). The relationship between DM and increased hospitalisation was stronger in rural areas among those with MS and stronger in White groups among controls. Conclusions: People with MS are more likely to be diagnosed with DM, resulting in greater all-cause hospitalisation and all-cause mortality. This highlights the importance of equitable screening, prevention, and management of DM in people living with MS, with particular attention to geographical health inequalities.

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Rare neurological and neurodevelopmental variants in ALS link to onset, survival and family history

O'Donoghue, C.; Kacar, E.; Gomes, T.; Costello, E.; Pender, N.; Peelo, C.; Ryan, M.; Heverin, M.; Byrne, S.; Bede, P.; Hardiman, O.; McLaughlin, R. L.; Byrne, R. P.

2026-06-10 genetic and genomic medicine 10.64898/2026.06.09.26354977 medRxiv
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Background: Neurological, neuropsychiatric, and neurodevelopmental disorders cluster in ALS families, sharing a common genetic architecture with ALS. Pathogenic variants in genes associated with other neurological, neurodevelopmental, or neuropsychiatric disorders may also co-occur in ALS and modify phenotype. We have sought to determine the prevalence and clinical pattern of likely-pathogenic/pathogenic (LP/P) non-ALS neurological, neurodevelopmental, and neuropsychiatric variants, alone and in combination with ALS-gene variants, in two large ALS cohorts. Methods: Whole-genome sequencing (WGS) of 469 Irish and 774 Answer ALS people with ALS (pwALS) was analysed for ClinVar LP/P variants associated with other neurological (n = 15541), neurodevelopmental (n = 9761), and neuropsychiatric (n = 321) phenotypes. Inheritance patterns for associated genes (autosomal recessive/autosomal dominant) along with the associated phenotype were validated using OMIM. Standardised clinical data included family history, site and age of onset, El Escorial category, survival, motor decline, and cognitive and behavioural assessments. Known ALS-gene variants and C9orf72 repeat expansion status were included for each cohort. Results: Non-ALS neurological variants were identified in 47/469 (10.0%) Irish and 69/774 (8.9%) Answer ALS participants, most frequently in hereditary spastic paraplegia-associated genes (3.2% Irish; 2.8% Answer ALS). Irish neurological variant carriers showed higher frequency of respiratory onset (10.6% vs 1.2%, Fisher's exact p = 0.002, {Phi} = 0.20) and fewer premorbid behavioural symptoms (0.92 +/- 0.56 vs 3.08 +/- 0.97, Cohen's d = -0.40). Neurodevelopmental variants occurred in 12/469 (2.6%) Irish and 20/774 (2.6%) Answer ALS participants. In the Irish cohort, neurodevelopmental variant carriers had significantly shorter survival in Cox proportional hazards model (log-rank p = 0.005), corresponding to a more than two-fold increased hazard of death (HR = 2.25, 95% CI 1.26-4.00), and had significantly increased familial burden of neuropsychiatric disorders among first- and second-degree relatives (negative binomial IRR for carriers = 2.41, 95% CI: 1.12-5.18, p = 0.025). Across combined cohorts, 18 individuals (Irish n = 8; Answer ALS n = 10) carried [&ge;]2 LP/P variants spanning ALS and non-ALS genes. Conclusion: Rare LP/P variants in genes associated with other neurological and neurodevelopmental disorders occur in up to 12% of pwALS across two independent cohorts. Carriers show distinct phenotypes, shorter survival, and characteristic family history patterns. These findings suggest that extended pleiotropic and oligogenic architectures may contribute to ALS heterogeneity.

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A Hierarchical Visual EEG Framework for the Assessment of Disorders of Consciousness

Chen, Y.; Ge, Q.; Li, H.; Kang, X.; Chen, Q.; He, W.; Sun, Y.; Zhang, S.; Laureys, S.; Chen, X.; He, J.; Gao, X.

2026-06-05 neurology 10.64898/2026.06.04.26354678 medRxiv
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The objective assessment of patients with disorders of consciousness (DOC) remains a significant clinical challenge. Behavioral scales like the Coma Recovery Scale-Revised (CRS-R) are susceptible to rater subjectivity and have difficulty in detecting patients with cognitive-motor dissociation (CMD), while existing electrophysiological paradigms typically evaluate isolated processing levels, especially in visual functions. To address these limitations, we developed a novel, hierarchical visual EEG framework that evaluates three progressive tiers of visual processing--sensory input, selective attention, and object discrimination--within a single, unified paradigm. This framework uses steady-state and event-related potentials, analyzed with statistical testing and machine learning, to provide objective detection. In a cohort of 85 participants, the framework demonstrated a robust alignment with behavioral CRS-R levels and successfully identified CMD patients missed by bedside behavioral examinations. Notably, model predictions derived from this framework showed a significant correlation with 3-month clinical outcomes. This prognostic utility generalized effectively and remained consistent across distinct EEG acquisition systems in an independent validation cohort of 17 patients. In summary, this work offers electrophysiological validation for the hierarchical design of the CRS-R and provides a practical tool for bedside objective assessment of DOC.

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Multi-ancestry analysis of POLG variants in Parkinson's disease

Tay, Y. W.; Elsayed, I.; Yeow, D.; James, M.; Kung, P.-J.; Screven, L.; Dilliott, A. A.; Alcalay, R. N.; Fang, Z.-H.; Tan, A. H.; Global Parkinson's Genetics Program (GP2), ; Sue, C. M.; Lange, L. M.; Perinan, M. T.

2026-06-08 genetic and genomic medicine 10.64898/2026.06.07.26354811 medRxiv
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Introduction: Variants in the polymerase gamma (POLG) gene are associated with a wide range of mitochondrial disorders. Emerging evidence suggests a potential link between POLG variants and Parkinson's disease (PD); yet, results remain inconclusive. Objectives: To investigate the genetic spectrum and prevalence of POLG variants in PD across diverse ancestries. Methods: We leveraged multi-ancestry genetic data from the Global Parkinson's Genetics Program (GP2), including genotyping data from 98,589 and short-read sequencing data from 36,022 individuals. We performed a POLG rare variant screen, case-control association, and gene-level burden analyses. Results: Five PD cases carried potentially biallelic rare pathogenic/likely pathogenic POLG variants. Additionally, 228 individuals (<1%; 161 PD cases, 28 individuals with other neurological disorders, and 39 controls) carried 34 distinct rare pathogenic/likely pathogenic heterozygous variants, with no significant frequency differences between cases and controls, except for the p.Ala467Thr variant in the European population. The co-inherited pathogenic variants p.Thr251Ile and p.Pro587Leu were present in <1% of both cases and controls, with no significant group differences. Burden and variant-level association analyses showed no association between rare POLG variant burden or common POLG variant enrichment and PD. Conclusions: POLG variants are overall rare in PD. The identification of rare pathogenic variants among PD cases suggests that POLG-related mitochondrial dysfunction may contribute to PD in isolated instances, particularly under recessive inheritance. Our findings support a role for POLG variants in select cases and underscore the need for larger-scale sequencing and functional studies.

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Conus Medullaris Position in 9,808 Pediatric Lumbosacral MRI Examinations: A Large-Cohort Reference Distribution and the Normally Positioned Conus in Surgically Treated Tethered Cord

Tang, W.; Dong, Y.; Chen, J.; Yang, Y.; Huang, H.; Yu, M.; Zhu, J.; Shen, G.

2026-06-08 radiology and imaging 10.64898/2026.06.06.26355031 medRxiv
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Background. Tethered cord syndrome (TCS) is classically associated with a low-lying conus medullaris, yet many surgically treated children have a normally positioned conus (occult TCS). Large-scale normative data on conus position in children, and the diagnostic value of quantitative conus assessment, are limited. Purpose. To establish a large-cohort reference distribution for conus medullaris termination level in children, to quantify conus position in children surgically treated for presumed (occult) TCS, and to test whether automated conus segmentation and radiomics can distinguish TCS from normal. Materials and Methods. In this retrospective single-center study, conus termination level was extracted from structured radiology reports of consecutive pediatric lumbosacral MRI examinations and encoded numerically (L1 = 1, L2 = 2, etc.). Children surgically treated for tethered cord were identified by linkage to an operative registry (name and date of birth) and restricted to preoperative examinations. A deep-learning model (nnU-Net) was trained for conus segmentation on axial T2-weighted images. IBSI-compliant radiomic features were extracted; reproducibility was assessed by intra- and inter-observer intraclass correlation (ICC). A case-control radiomics analysis used batch-only ComBat harmonization and cross-validated L1-penalized logistic regression; discrimination was compared with conus level by paired bootstrap. Results. Among 9,808 examinations with a parseable conus level (98.5% of reports; parser validated against dual blinded annotation, 99.4% agreement, weighted kappa 0.946), the conus terminated in the L1 region in 85.7% and the L2 region in 14.3% of the reference cohort (postoperative examinations excluded, n = 9,655); a low-lying conus (>=L3) occurred in only 0.05% (5/9,655), and remained rare (0.14%, 14/9,808) including operated examinations (median L1; mean 1.13 +/- 0.33). A slightly more cephalad position was seen with increasing age (negligible correlation). Among 475 preoperative children surgically treated for tethered cord, 99.6% had a normally positioned conus (<=L2) and only 0.4% were low-lying. Automated conus segmentation achieved a held-out Dice of 0.85. Conus radiomics likewise did not distinguish TCS from controls (equivalence-tested null; full segmentation/radiomics pipeline reported in the companion methodological paper). Conclusion. In children, the conus medullaris terminates at L1-L2 in more than 99% of cases and is normally positioned in virtually all children surgically treated for TCS. Within the conus, neither position nor texture (radiomics) identifies tethered cord; whether the filum terminale carries a diagnostic signal was not tested here.

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Sensor Geometry, Not Signal Processing, Limits Opportunistic Detection of Capillary-Refill-Like Signals by Rule-Based and Language-Model Methods in Archived ICU Waveforms

Landry, T. C.; Kim, Y.

2026-06-09 intensive care and critical care medicine 10.64898/2026.06.07.26355129 medRxiv
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Background. Capillary refill time is a resuscitation target in septic shock,1-4 but bedside measurement is examiner-dependent. An ICU monitor co-records a photoplethysmogram on the pulse oximeter and intermittent noninvasive blood pressure cuff cycles; if the probe and the cuff share a limb, each cycle is an unplanned vascular occlusion test on the distal microvascular bed. Standard practice places the two on opposite limbs. Objective. To measure how often, in MIMIC-IV-WDB v0.1.0, charted cuff cycles show the photoplethysmographic morphology expected of a same-limb cuff and probe, and to characterize the candidate capillary refill-like signal when that morphology is present. Methods. MIMIC-IV-WDB v0.1.05 was linked to the MIMIC-IV clinical database.6 A pre-registered rule-based detector identified candidate occlusion-reperfusion signatures on the 1-Hz perfusion-index envelope around each charted cuff timestamp. The primary endpoint was the proportion of cuff cycles suitable for analysis that were detector-positive at a 15-second reperfusion threshold, with 95% confidence intervals estimated by resampling patients at a fixed seed. A secondary analysis used a locally hosted multimodal language model (a Gemma-3 derivative on a non-device server) to adjudicate the same signature on perfusion-index plots; no MIMIC-IV-WDB content left the workstation. Results. Of 9,224 charted cuff cycles, 8,909 had a usable pulse-oximeter waveform, and 268 cycles in 15 patients (4.30% of the 6,236 cuff cycles suitable for analysis, 95% CI 2.60 to 6.03) met the primary 15-second threshold. The language model adjudicated the same cycles and called 1,367 of the 8,909 cycles with a usable waveform (15.34%) signature-present, roughly five times the detectors count. Because no laterality ground truth exists, agreement with a single blinded reader served as the comparator rather than accuracy. The two methods were about equally concordant with the reader: precision was 0.25 (95% CI 0.14 to 0.39) for the detector and 0.24 (95% CI 0.10 to 0.35) for the language model, although reweighting to the full population of cycles with a usable waveform lowered the language model to 0.030 (95% CI 0.009 to 0.053). These estimates are reference-limited: a blinded re-read of a 150-card subsample showed only moderate intra-rater reliability (Cohen {kappa} 0.46 to 0.59) with systematic undercalling on the first pass, and rescoring against the corrected re-read roughly doubled precision for both methods. Conclusions. Opportunistic extraction of capillary refill-like signals from archived ICU pulse oximetry is limited in two distinct ways. First, sensor geometry limits how often the signal is recordable: cuff cycles rarely show the morphology expected of a same-limb cuff and probe pair, consistent with opposite-limb placement, so the bottleneck is geometry rather than signal processing. Second, the modest reliability of morphology adjudication limits how well any single flagged cycle can be confirmed: against a blinded reader the detector is a usable screen but a noisy confirmer, the reference is itself only moderately reliable, and the language model is no more concordant despite flagging many more cycles. The minority of cycles in which the morphology appears contain a candidate signal that may merit prospective study under controlled placement with laterality recorded.

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Scoping national research infrastructure to inform the design and delivery strategy for a platform clinical trial in Parkinsons disease

Petty, R.; Zeissler, M.-L.; Agarwal, V.; Allison, J.; Bartolomeu-Pires, S.; Bartlett, M.; Croucher, R.; Collins, H.; Collins, S.; Davies, E.; Duffen, J.; Ellis-Doyle, R.; Gonzalez-Robles, C.; Inches, J.; Miller, L.; Mills, G.; Wonnacott, S.; Foltynie, T.; Carroll, C.; Mullin, S.; EJS ACT-PD Consortium,

2026-06-05 neurology 10.64898/2026.06.04.26354792 medRxiv
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Objective To map national Parkinsons disease (PD) research capability to inform an inclusive delivery strategy for a large-scale clinical trial. Background Few people with PD participate in clinical trials, particularly from under-served populations. The Edmond J Safra Accelerating Clinical Trials in PD initiative (EJS ACT-PD) aims to deliver an inclusive multi-arm multi-stage (MAMS) disease modification PD trial. Methods A survey disseminated to National Health Service (NHS) hospitals assessed PD research capability regarding trial experience, rater expertise, trial facilities and specialist investigations. A process was developed to categorise sites into 3 tiers, with tier 1 having the least PD-research capability or experience, and tier 3 being experienced specialist centres. We mapped tiers to PD prevalence, social deprivation and ethnic diversity to identify infrastructure gaps. We developed trial delivery strategies to facilitate rapid and inclusive recruitment. Results Out of 97 survey responses, 43 sites were categorised as tier 1, 33 as tier 2 and 21 as tier 3. Diversity and social deprivation index were higher for tier 3 sites (predominantly urban). A greater proportion of tier 1 and 2 sites were situated in areas of higher PD prevalence (predominantly rural). Ninety one percent of sites reported experience with remote trial delivery methods. Our delivery strategy included: initial trial set-up at tier 3 sites to enable rapid and ethnically diverse recruitment; core funded staff within strategic sites to develop regional solutions for inclusive trial participation and to enable research opportunity provision in areas where currently very little exists, and a hybrid delivery model of in-person and remote study visits, ensuring maximal acceptability and deliverability. Conclusions The mapping of current PD research delivery capability has allowed us to develop a trial delivery strategy that will broaden the provision of research participation opportunity to under-served groups. It has also enabled existing infrastructure to be maximised while mitigating identified gaps.

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EEG-Derived Proxies of Cortical Excitability in Epilepsy: Group Discrimination, Temporal Stability and Medication Sensitivity

Duma, G. M.; Valencia, N.; Rasero, J.; Bonanni, P.; Pellegrino, G.

2026-06-04 neurology 10.64898/2026.06.02.26354693 medRxiv
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Rationale: Reliable electroencephalography (EEG) biomarkers of cortical excitability could improve diagnosis and longitudinal monitoring in epilepsy, yet it remains unclear which metrics best balance sensitivity across individuals with intra-individual stability over time. Methods: We analyzed scalp EEG recordings from the open-access Temple University Hospital EEG Epilepsy Corpus, comprising 1,404 recordings from 96 individuals with neurologist-confirmed epilepsy and 85 healthy controls across multiple sessions. Eight global measures were computed: aperiodic exponent and offset, sample entropy, detrended fluctuation analysis exponent and derived index, spatial gamma-band phase consistency, and absolute and relative alpha power. Group differences were assessed by permutation tests with false discovery rate correction at recording, session, and subject levels. Associations with antiseizure medication burden, temporal stability, and cross-metric correlation structure were evaluated as secondary analyses. Results: Aperiodic parameters showed the most robust case-control separation, remaining significant after subject-level averaging (exponent: median difference = 0.20, q = 0.010; offset: median difference = 0.25, q = 0.011). Entropy and alpha power distinguished groups at the recording and session levels, while gamma-band phase consistency was significant at the session level only; none of these survived subject-level averaging, suggesting greater state-dependency. Higher medication burden was associated with reductions in alpha power and detrended fluctuation analysis, and adjusting for it substantially attenuated group differences, though residual effects in the aperiodic exponent persisted. Cross-metric correlation structure was preserved between groups but modestly reorganized by medication burden. Conclusions: Aperiodic spectral parameters are the most robust EEG markers of epilepsy, reflecting stable trait-like network properties. Complexity and synchrony measures capture complementary, state-sensitive dimensions. Medication burden substantially influences multiple metrics, underscoring the need to account for pharmacological effects when interpreting EEG biomarkers in epilepsy.

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Multimodal MRI Characterization of Nucleus Basalis of Meynert Degeneration: Structural Atrophy and Free-water Diffusion in Parkinson's Disease Cognitive Impairment

Negida, A.; Zaman, A.; Wyman-Chick, K. A.; Hallak, R.; Miller-Patterson, C.; Berman, B. D.; Ofori, E.; Barrett, M. J.

2026-06-09 neurology 10.64898/2026.06.08.26355183 medRxiv
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Background: Cognitive impairment in Parkinson's disease (PD) is linked to degeneration of the cholinergic basal forebrain, particularly cholinergic nucleus 4 (Ch4) in the nucleus basalis of Meynert. Structural and diffusion MRI separately detect this degeneration, but few studies have combined these modalities across the PD cognitive spectrum. Methods: We analyzed 92 participants: 14 healthy controls (HC), 35 PD with normal cognition (PD-NC), 33 with mild cognitive impairment (PD-MCI), and 10 with dementia (PDD). For Ch4 and cholinergic nuclei 1, 2, and 3 (Ch1-3) in the medial septal/diagonal band complex, we determined TIV-normalized gray matter density (GMD) and free-water (FW) fraction. We evaluated group differences, cognitive correlations, adjusted multivariable regression, and exploratory ROC discrimination. Results: Ch4 GMD was significantly lower in PDD compared to PD-MCI (p=0.007), PD-NC (p<0.001), and HC (p<0.001). Ch4 GMD was also lower in PD-MCI versus HC (p=0.028); the PD-MCI versus PD-NC difference was not significant after correction (p=0.074). Ch1-3 GMD was lower in PDD versus PD-NC (p=0.008) and HC (p=0.009). Ch4 and Ch1-3 FW were elevated in PDD versus all other groups (all p<0.01). Among PD patients (n=78), MoCA was positively correlated with Ch4 GMD ({rho}=0.49) and Ch1-3 GMD ({rho}=0.42) and negatively correlated with Ch4 FW ({rho}=-0.51) and Ch1-3 FW ({rho}=-0.40; all p<0.001). In the full four-metric model, Ch4 GMD and Ch4 FW were the only independent basal forebrain predictors (Ch4 GMD {beta}=+2.04, p<0.001; Ch4 FW {beta}=-1.46, p=0.005) of MoCA score. The combined Ch4 GMD + Ch4 FW model showed high discrimination for PDD versus non-demented PD (AUC=0.934; optimism-corrected AUC=0.925). Conclusions: Structural and free-water diffusion MRI provide complementary information about Ch4 degeneration in PD. The combined Ch4 model showed promising exploratory discrimination of PDD; validation in larger independent samples is needed.

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Human genetic evidence links serine biosynthesis to diabetic peripheral neuropathy

Fridman, V.; Kakar, A.; Jensen, A.; Van de Vondel, L.; Wheeler, A.; Phillips, L. S.; Zhou, J.; Zuchner, S.; Reusch, J.; Raghavan, S.

2026-06-10 genetic and genomic medicine 10.64898/2026.06.09.26355286 medRxiv
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Diabetic peripheral neuropathy (DPN) is a common and disabling condition for which no disease-modifying therapies are available. Glycemic and metabolic drivers do not fully explain why only a subset of individuals with diabetes develop DPN, and genetic contributors remain poorly defined. We aimed to perform a multi-population genome-wide association study (GWAS) of DPN to highlight potential new etiological pathways and therapeutic targets. Methods We performed a multi-population GWAS of neuropathy in people with and without diabetes using the VA Million Veteran Program and UK Biobank, followed by replication in the All of Us Research Program (AoU), and gene-based and gene-set analyses to identify implicated pathways. Causal relationships between circulating serine levels and DPN were further tested using two sample Mendelian randomization. To further evaluate pathogenic potential, we analyzed rare, high impact variants in GWAS implicated genes among individuals with unresolved inherited neuropathies using the GENESIS platform. Findings Among individuals with type 2 diabetes, we identified seven genome wide significant loci (p<5x10-): PHGDH and PSPH (key serine synthesis genes), TEAD1, CYP4F11, LARGE1, FTO, and COBLL1. No loci were significant in individuals without diabetes or with type 1 diabetes. Four loci (PHGDH, TEAD1, FTO and CYP4F11) replicated in AoU (p <0.05). Mendelian randomization demonstrated that higher genetically predicted serine levels were associated with lower DPN risk, consistent with a causal role of serine metabolism in disease pathogenesis. Rare-variant burden analyses revealed associations of predicted deleterious variants with inherited neuropathy case status in PHGDH (odds ratio [OR] 12.7 [95% CI 7.9, 20.4]), PSPH (OR 8.5 [7.2, 10.2]), PHKG1 (OR 4.8 [3.7, 6.3]), and LARGE1 (OR 0.007 [0.0004, 0.1]). Interpretation Convergent genetic evidence across common and rare variation implicates serine synthesis as a key pathway in DPN. These findings link diabetic and inherited neuropathies through a shared metabolic mechanism, identifying serine metabolism as a potential therapeutic target.

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Development and Prospective Validation of Predictive Model for Early Hemodynamic Deterioration in Critical Care: A Multicenter Study

Nagori, A.; Singh, P.; Firdos, S.; Devadiga, A.; Vats, V.; Gupta, A.; Bandhey, H.; Ailavadi, P.; Awasthi, R.; Narotam, N.; Mishra, A.; Lodha, R.; Sethi, T.

2026-06-10 intensive care and critical care medicine 10.64898/2026.06.05.26353765 medRxiv
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High-frequency physiological monitoring in ICUs can identify impending deterioration hours before clinical recognition yet extracting reliable early-warning signals from noisy vital-sign streams remains challenging. We present SIgnose, an interpretable prediction framework for early detection of abnormal shock index (SI), built from routinely monitored vital signs using physiologic variability and nonlinear time-series features. SIgnose was developed on the eICU Collaborative Research Database and externally validated on the MIMIC-III adult database and a pediatric SafeICU cohort (AIIMS New Delhi), with additional prospective validation in the pediatric ICU. We benchmarked three representation strategies: (i) engineered physiologic variability and nonlinear time-series features, (ii) deep learning, and (iii) Llama-3.1-8B embeddings with low-rank adaptation. Physiologic variability features consistently demonstrated superior cross-cohort generalization. The final model used 3,970 features from five vital signs to predict abnormal SI up to 8 hours ahead, achieving AUROC 0.861 (95% CI 0.859-0.863) and AUPRC 0.927 (95% CI 0.925-0.929) on eICU. External validation yielded AUROC 0.870 (95% CI 0.863-0.876) and AUPRC 0.935 (95% CI 0.930-0.940) on MIMIC-III, and AUROC 0.875 (95% CI 0.863-0.888) and AUPRC 0.915 (95% CI 0.898-0.930) on SafeICU; prospective pediatric validation (n = 88) achieved AUROC 0.885 (95% CI 0.868-0.902) and AUPRC 0.911 (95% CI 0.882-0.936). SHAP interpretability analysis identified heart rate variability, respiratory trend dynamics, and multi-scale blood pressure variability as key early-warning signatures. These findings establish SIgnose as a reproducible, low-compute, early-warning framework and demonstrate that physiologic variability features provide robust, generalizable representations for early deterioration detection across adult and pediatric critical care.

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Daily symptom monitoring is sustainable over months: retention, not compliance, is the primary barrier to long-duration digital tracking

Gunsilius, C. Z.; Pei, P.; Carayannopoulos, A.; Petzschner, F. H.

2026-06-10 rehabilitation medicine and physical therapy 10.64898/2026.06.08.26355180 medRxiv
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Ecological momentary assessment (EMA) enables real-time, longitudinal measurement of symptoms and behavior via smartphones, yet nearly all feasibility evidence comes from protocols lasting one to two weeks, far shorter than the timescales over which chronic diseases fluctuate and clinical decisions unfold. Whether daily compliance can be sustained over months, or whether it decays as short-protocol trends predict, is unknown. Here, 214 participants (173 with pain, 41 healthy controls) completed a 4-month (122-day) EMA protocol via the Soma smartphone app, generating 26,907 check-ins. Half the sample completed the full protocol without a two-week lapse. Aggregate compliance appeared moderate (50%), but this conflated two distinct phenomena: when recomputed over each participant's active period, compliance rose to 71%, with 91% achieving moderate-to-high adherence, and remained stable across all 17 study weeks. Pain status predicted earlier disengagement but not lower compliance among those who remained; after adjustment for differential retention, group differences disappeared. To our knowledge, this is the longest continuous daily EMA evaluation in a clinical population. It suggests the primary barrier to long-duration EMA is not declining motivation among active participants but concentrated early disengagement, with direct implications for the design of digital health protocols, decentralized trials, and remote symptom monitoring.

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Exploratory Assessment of Pulsed-Wave Doppler Representations of Lung Sounds Using Deep Learning: An In-Vitro Phantom Study

Saad, A. A.; Murthi, S. B.; Boctor, E. M.; Teeter, W. A.; Seam, N.

2026-06-10 respiratory medicine 10.64898/2026.06.09.26353787 medRxiv
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The increasing availability of portable ultrasound systems motivates exploration of novel approaches to respiratory signal assessment. In this in-vitro study, we investigate whether pulsed-wave (PW) Doppler ultrasound can capture structured spectral patterns from replayed lung sound recordings. Digitized respiratory sounds were replayed through a tissue-mimicking ultrasound phantom, generating 1,478 PW Doppler spectral images from recordings associated with healthy subjects and several externally labeled disease categories. Exploratory classification experiments using a ResNet-18 architecture demonstrated that these Doppler representations contain learnable differences under controlled conditions. These findings motivate further investigation into PW Doppler as a potential representation of respiratory acoustics.

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Synapse loss in Progressive Supranuclear Palsy post-mortem reflects clinical and pathological disease severity and 11C-UCB-J PET in vivo

Nolan, G.; Holland, N.; Yang, S. W.; Dall'O, G. M.; Chen, Q.; Allinson, K.; Savulich, G.; Halliday, K.; Naessens, M.; Hong, Y. T.; Fryer, T. D.; Aigbirhio, F. I.; Malpetti, M.; Kaalund, S. S.; O'Brien, J. T.; Lakatos, A.; Rowe, J. B.; Quaegebeur, A.

2026-06-09 neurology 10.64898/2026.06.02.26354325 medRxiv
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Synapse loss is an early feature of neurodegeneration and may provide sensitive biomarkers for experimental medicine. Positron emission tomography (PET) with the synaptic vesicle glycoprotein 2A radioligand [11C]UCB-J shows widespread signal reduction across dementias. However, it remains unclear which aspects of synaptic integrity [11C]UCB-J PET measures. We developed a histological-imaging pipeline to quantify structurally intact synapses in post-mortem brain tissue. We applied it to six donors with the tauopathy progressive supranuclear palsy (PSP) who had ante-mortem [11C]UCB-J-PET, alongside six controls across 11 brain regions. Synapse loss in PSP was widespread but region-specific across cortical, subcortical, and brainstem regions. Greater synapse loss was associated with higher tau burden and pathology, and cortical synaptic density correlated with ante-mortem cognition. Post-mortem synaptic density correlated with in vivo [11C]UCB-J-PET signal. This study provides validation of SV2A PET as a biomarker of synaptic density and supports integration of imaging with histopathology in neurodegenerative disease research.